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NEWS.md
In Rediscover: Identify Mutually Exclusive Mutations
version 0.3.1:
remove dependency of 'TCGAbiolinks'.
version 0.3.0:
getMutex and getMutexAB computes the exact p-value using the ShiftConvolvePoibin R package (Peres, N., Lee, A., and Keich, U.,2020). Mixed and exact have been enhanced in terms of speed and memory usage.
version 0.2.0:
getMutex and getMutexAB have three different approximations of the Poison-Binomial distribution function: a "RefinedNormal"" Approximation (Volkova, 1996), "Binomial"" with two parameters (Cam, 1960), and a "Shifted Binomial" with three parameters (Peköz, Shwartz, Christiansen, & Berlowitz, 2010). This last is the approximation by default for both functions. Moreover, some bugs have been fixed.
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Rediscover documentation built on April 14, 2023, 5:14 p.m.
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version 0.3.1:
remove dependency of 'TCGAbiolinks'.
version 0.3.0:
getMutex and getMutexAB computes the exact p-value using the ShiftConvolvePoibin R package (Peres, N., Lee, A., and Keich, U.,2020). Mixed and exact have been enhanced in terms of speed and memory usage.
version 0.2.0:
getMutex and getMutexAB have three different approximations of the Poison-Binomial distribution function: a "RefinedNormal"" Approximation (Volkova, 1996), "Binomial"" with two parameters (Cam, 1960), and a "Shifted Binomial" with three parameters (Peköz, Shwartz, Christiansen, & Berlowitz, 2010). This last is the approximation by default for both functions. Moreover, some bugs have been fixed.
Try the Rediscover package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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