Man pages for NBBttest
Negative Binomial Beta t-Test
| annotat | Annotation of genes within which alternative splicing occurs |
| betaparametab | Estimation of parameters alpha (alpha) and beta (beta) of... |
| betaparametVP | Estimation of parameters V and P in count data of RNA reads |
| betaparametw | Estimation of proportion weights |
| betattest | Beta t-test |
| DDX39_100 | DDX39 exon data with 100 exons |
| exondata | Exon data for NBBplot |
| gbetattest | Beta t-tests within groups |
| gtfa | gtf |
| jkttcell | Jurkat T-cell transcritomic data |
| mbetattest | Performance of multiple beta t-test on count data |
| mtpvadjust | Adjust p-values for multiple comparisons |
| myheatmap | Heatmap |
| myheatmap2 | Heatmap2 |
| NBBplot | Plot differential expression of exons within a specified gene... |
| NBBttest-package | Negative Beta Binormail t-Test Package |
| normalize | Normalization of data |
| oddratio | Calculation of zeta (zeta) |
| omega | Omega calcularion |
| pathwayHeatmap | Heatmap for pathways found by gene ontology analysis |
| pathwy.A.up | Pathway or function data |
| pratio | Calculation of psi (psi ) |
| prime3_PRP8_50 | 3'UTR splicing data of 50 genes detected in the knockdowned... |
| QC | Count data quality check |
| result | Jurkat T-cell transcritomic data with isoforms selected by... |
| sgRNA | sgRNA dataset |
| simSplicing | Simulated alternative splicing |
| simulat | Simulation |
| skjt | Simulated Null Transcriptomic data |
| smbetattest | Performance of multiple beta t-test on simulated data |
| subdata | Splite data into two subsets |
| upGAm | Count data of group A treated breast cancer in mice |
