HybridMicrobiomes: Analysis of Host-Associated Microbiomes from Hybrid Organisms

A set of tools to analyze and visualize the relationships between host-associated microbiomes of hybrid organisms and those of their progenitor species. Though not necessary, installing the microViz package is recommended as a check for phyloseq objects. To install microViz from R Universe use the following command: install.packages("microViz", repos = c(davidbarnett = "https://david-barnett.r-universe.dev", getOption("repos"))). To install microViz from GitHub use the following commands: install.packages("devtools") followed by devtools::install_github("david-barnett/microViz").

Getting started

Package details

AuthorBenjamin Camper [aut], Zachary Lauglin [ctb], Daniel Malagon [ctb], Robert Denton [ctb], Sharon Bewick [aut, cre], National Science Foundation Division of Integrative Organismal Systems (award #2104605) [fnd], Clemson University Support for Early Exploration and Development (CU SEED) Grant [fnd]
Bioconductor views Software phyloseq
MaintainerSharon Bewick <sbewick@clemson.edu>
LicenseGPL-2
Version0.1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("HybridMicrobiomes")

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HybridMicrobiomes documentation built on May 29, 2024, 2:15 a.m.