backgroundDist | Background distribution. |
computeScoreDist | Compute exact position weight/count matrix score... |
INR | The position count matrix for INR. |
plotDist | Plot background and signal distributions. |
ProfileDist-class | ProfileDist |
regularizeMatrix | Careful regularization (pseudocount addition) to a position... |
scoreDistCutoffs | False discovery rate and power for PWM Score distributions. |
signalDist | Signal distribution. |
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