Files in megadepth
megadepth: BigWig and BAM related utilities
README.Rmd
NEWS.md
README.md
megadepth documentation built on Feb. 5, 2021, 2:03 a.m.
NAMESPACE
DESCRIPTION
INSTALL
R/bam_to_junctions.R
R/prefix_utils.R
R/megadepth.R
R/read_junction.R
R/install.R
R/get_coverage.R
R/read_coverage.R
R/bam_to_bigwig.R
R/utils.R
inst/CITATION
inst/doc/megadepth.R
inst/doc/megadepth.Rmd
inst/doc/megadepth.html
inst/tests/test.bam
inst/tests/test.bam.all.bw
inst/tests/test3.bam
inst/tests/long_reads.bam
inst/tests/test2.bam
inst/tests/test_exons.bed
inst/tests/test.bam.bai
inst/tests/testbw2.bed
inst/tests/test_output_files/test.bam.all.bw
inst/tests/test_output_files/test.bam.unique.tsv
inst/tests/test_output_files/test.bam.unique.bw
inst/tests/test_output_files/test.bam.annotation.tsv
inst/tests/test_output_files/test.bam.softclip.tsv
inst/tests/test_output_files/test.bam.alts.tsv
inst/tests/test_output_files/test.bam.ends.tsv
inst/tests/test_output_files/test.bam.frags.tsv
inst/tests/test_output_files/test.bam.starts.tsv
build/vignette.rds
tests/testthat.R
tests/testthat/test-bam_to_bigwig.R
tests/testthat/test-read_junction.R
tests/testthat/test-megadepth_main_tests.R
tests/testthat/test-install_megadepth.R
tests/testthat/test-get_coverage.R
tests/testthat/test-bam_to_junctions.R
vignettes/megadepth.Rmd
man/install_megadepth.Rd
man/megadepth_cmd.Rd
man/read_junction_table.Rd
man/read_coverage.Rd
man/bam_to_bigwig.Rd
man/bam_to_junctions.Rd
man/get_coverage.Rd
