Nothing
shiny::MockShinySession$new()
to simulate Shiny session objects.SearchColumns
field of the Table
subclasses.saveState=
argument.ExperimentColorMap
inherits from Annotated
.ComplexHeatmapPlot
documentation.ComplexHeatmapPlot
observers, most obviously for the assay choice..refineParameters()
for FeatureAssayPlot
, SampleAssayPlot
protects the x-axis choice against absent metadata.initial=
in iSEE()
.ColorByFeatureDynamicSource
UI element in ColumnDotPlot
s.DotPlot
.[[<-
assignment into Panel
classes.DotPlot
panels.Table
panels..definePanelTour()
generic.HiddenColumns
mechanism to all Table
subclasses.HiddenColumns
slot to hide columns in ColumnDataTable
s and RowDataTable
s.Table
s when the number of columns change.Table
multiple selections..defineOutput
signature..exportOutput
method for the ComplexHeatmapPlot
class.ComplexHeatmapPlot
class.sizeBy
observers.createLandingPage()
man page.CustomRowsText
slot in the ComplexHeatmapPlot
constructor.*DynamicSource
slots.TENxPBMCData
to Suggests:
.ReducedDimensionPlot()
man page.renderDT
to rerun expression upon panel reorg.bioconductor/bioconductor_docker:devel
.NA
groupings in subsetPointsByGrid()
.rowData
in RowDotPlot
panels..create_visual_box()
.selected.color
to single selections.panel.width
, panel.height
, and assay
to global options..checkboxInputHidden()
.iSEEOptions
..allowableYAxisChoices()
and .allowableXAxisChoices()
methods to intercept choices of x/y-axis variables.iSEE()
in no-SE mode) for enterprise deployments.se
objects missing dimnames
.createCustomPlot()
and createCustomTable()
to provide on-ramp for making customized panels.iSEEOptions
.ComplexHeatmap
.*DataPlot
UI elements.rbind()
of data.frame
and DataFrame
objects.&&
with variable length greater than 1.scater
argument.SingleCellExperiment::clearSpikes()
, SingleCellExperiment::clearSizeFactors()
.aceEditor()
and fileInput()
.isColorMapCompatible()
to checkColormapCompatibility()
.checkColormapCompatibility()
.scater::normalize()
by scater::logNormCounts()
.redDimPlotDefaults()
against empty reducedDims
.isSpike()
and sizeFactorNames()
.modeEmpty()
.initialPanels
argument.ReprocessedAllenData()
to load only tophat_counts
assay.ReprocessedAllenData()
following the deprecation of data(allen)
.Name
field of initialPanels
.biocViews
.NA
values when computing the range of coloring scales.DelayedArray
assays.annotateEnsembl()
.BiocManager
message.?defaults
help page by panel type.sapply()
.importFrom
instructions closer to the relevant code.plot.data
beyond X
and Y
in all.coordinates
.
See constant .allCoordinatesNames
.
Necessary for correct behaviour of brushes on faceted plots.Any scripts or data that you put into this service are public.
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