coseq: Co-Expression Analysis of Sequencing Data

Co-expression analysis for expression profiles arising from high-throughput sequencing data. Feature (e.g., gene) profiles are clustered using adapted transformations and mixture models or a K-means algorithm, and model selection criteria (to choose an appropriate number of clusters) are provided.

Package details

AuthorAndrea Rau, Cathy Maugis-Rabusseau, Antoine Godichon-Baggioni
Bioconductor views GeneExpression ImmunoOncology RNASeq Sequencing Software
MaintainerAndrea Rau <andrea.rau@inrae.fr>
LicenseGPL (>=3)
Version1.14.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("coseq")

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coseq documentation built on Nov. 8, 2020, 5:18 p.m.