examples/get.cell.dists.example.R
In cellTree: Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

# Load pre-computed LDA model for skeletal myoblast RNA-Seq data from HSMMSingleCell package:
data(HSMM_lda_model)

# Compute cell pairwise distances:
b.tree = get.cell.dists(HSMM_lda_model)

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cellTree documentation built on Nov. 8, 2020, 5:05 p.m.

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cellTree
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

examples/get.cell.dists.example.R
In cellTree: Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

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cellTree Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

examples/get.cell.dists.example.R In cellTree: Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

Try the cellTree package in your browser

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cellTree
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

examples/get.cell.dists.example.R
In cellTree: Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure