Files in biscuiteer

Convenience Functions for Biscuit

NEWS.md README.md R/CpGindex.R R/WGBSeq.R R/byChromArm.R R/fixAge.R R/getClock.R R/readBiscuit.R R/atRegions.R R/biscuiteer.R R/generics.R R/WGBSage.R R/flogit.R R/condenseSampleNames.R R/RRBSeq.R R/segToGr.R R/grToSeg.R R/getLogitFracMeth.R R/simplifySampleNames.R R/extremality.R R/filterLoci.R R/byExtremality.R R/binCoverage.R R/data.R R/summarizeBsSeqOver.R R/checkBiscuitBED.R R/fexpit.R R/fixNAs.R R/biscuitMetadata.R R/unionize.R R/makeBSseq.R vignettes/biscuiteer.Rmd man/fixNAs.Rd man/biscuitMetadata.Rd man/flogit.Rd man/ENSR_subset.hg19.Rd man/hg38.chromArm.Rd man/biscuiteer-package.Rd man/makeBSseq.Rd man/GRCh38.chromArm.Rd man/summarizeBsSeqOver.Rd man/unionize.Rd man/atRegions.Rd man/checkBiscuitBED.Rd man/hg19.chromArm.Rd man/H9state23unmeth.hg38.Rd man/seqinfo.hg38.Rd man/fexpit.Rd man/binCoverage.Rd man/HMM_CpG_islands.hg19.Rd man/CpGindex.Rd man/ENSR_subset.hg38.Rd man/grToSeg.Rd man/readBiscuit.Rd man/fixAge.Rd man/segToGr.Rd man/HMM_CpG_islands.hg38.Rd man/GRCh37.chromArm.Rd man/byChromArm.Rd man/clocks.Rd man/extremality.Rd man/filterLoci.Rd man/seqinfo.mm10.Rd man/biscuiteer-methods.Rd man/WGBSage.Rd man/getClock.Rd man/condenseSampleNames.Rd man/WGBSeq.Rd man/simplifySampleNames.Rd man/byExtremality.Rd man/H9state23unmeth.hg19.Rd man/getLogitFracMeth.Rd man/seqinfo.hg19.Rd man/RRBSeq.Rd tests/testthat.R tests/testthat/test_byExtremality.R tests/testthat/helper.R inst/doc/biscuiteer.R inst/doc/biscuiteer.Rmd inst/doc/biscuiteer.md inst/scripts/extdataDescription.md inst/scripts/clocks.R