Files in TransView
Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets
.Rinstignore
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
src/parse_sam.c
src/visuals.h
src/slice_dc.c
src/bam_plbuf.c
src/bin_density.h
src/Makevars
src/R_init_TransView.c
src/slice_dc.h
src/sam.c
src/parse_sam.h
src/bin_density.c
src/construct_dc.h
src/visuals.c
src/construct_dc.c
R/TransView_AllGenerics.R
R/TransView_plotTV.R
R/TransView_accessors.R
R/test_TransView_package.R
R/TransView_sliceT.R
R/TransView_AllClasses.R
R/TransView_plotTVData.R
R/zzz.R
R/TransView_setter.R
R/TransView_slice.R
R/TransView_parseReads.R
R/TransView_tools.R
R/TransView_show.R
vignettes/example_induced_top1k.png
vignettes/TransView.Rnw
man/peak2tss.Rd
man/histogram-methods.Rd
man/plotTV.Rd
man/slice1.Rd
man/rmTV.Rd
man/parseReads.Rd
man/TransView-package.Rd
man/plotTVData.Rd
man/TVResults-class.Rd
man/meltPeak.Rd
man/macs2gr.Rd
man/slice1T.Rd
man/annotatePeaks.Rd
man/tvStats-methods.Rd
man/gtf2gr.Rd
man/DensityContainer-class.Rd
tests/TransView_unit_tests.R
inst/doc/TransView.R
inst/doc/TransView.Rnw
inst/doc/TransView.pdf
inst/extdata/dm3_chr4.gtf.gz
inst/extdata/test.sam
inst/extdata/example_sam.bam
inst/extdata/example_ctrl_sam.bam
inst/extdata/test_macs.xls
inst/extdata/example_mm9.gtf.gz
inst/unitTests/test_slice.R
inst/unitTests/test_parseReads.R
