API for TCseq
Time course sequencing data analysis
| Global functions | |
|---|---|
| .timeclust | Source code |
| DBanalysis | Man page Source code |
| DBresult | Man page Source code |
| DBresult.cluster | Man page Source code |
| DBresult.filter | Source code |
| TCA | Man page Source code |
| TCA-class | Man page |
| TCA.accessors | Man page |
| TCAFromSummarizedExperiment | Man page Source code |
| checkBEDformat | Source code |
| clust | Man page |
| clust-class | Man page |
| clust.accessors | Man page |
| clustCenters | Man page |
| clustCenters,clust-method | Man page |
| clustCluster | Man page |
| clustCluster,clust-method | Man page |
| clustData | Man page |
| clustData,clust-method | Man page |
| clustMembership | Man page |
| clustMembership,clust-method | Man page |
| clustResults | Man page |
| clustResults,TCA-method | Man page |
| contrastMatrix | Source code |
| contrastNames | Source code |
| countReads | Man page Source code |
| counts | Man page |
| counts,TCA-method | Man page |
| counts.TCA | Source code |
| counts<-,TCA-method | Man page |
| countsTable | Man page |
| design | Man page |
| design,TCA-method | Man page |
| experiment | Man page |
| experiment_BAMfile | Man page |
| genomicFeature | Man page |
| genomicFeature,TCA-method | Man page |
| genomicIntervals | Man page |
| intervalmerge | Source code |
| multiplot | Source code |
| peakreference | Man page Source code |
| tcTable | Man page |
| tcTable,TCA-method | Man page |
| tca_ATAC | Man page |
| timeclust | Man page Source code |
| timeclustplot | Man page Source code |
| timecourseTable | Man page Source code |
