SingleR: Reference-Based Single-Cell RNA-Seq Annotation

Performs unbiased cell type recognition from single-cell RNA sequencing data, by leveraging reference transcriptomic datasets of pure cell types to infer the cell of origin of each single cell independently.

README.md Using SingleR to annotate single-cell RNA-seq data

Vignettes Man pages API and functions Files

Package details
Author	Dvir Aran [aut, cph], Aaron Lun [ctb, cre], Daniel Bunis [ctb], Jared Andrews [ctb], Friederike Dündar [ctb]
Bioconductor views	Annotation Classification Clustering GeneExpression SingleCell Software Transcriptomics
Maintainer	Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
License	GPL-3 + file LICENSE
Version	1.4.1
URL	https://github.com/LTLA/SingleR
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("SingleR")`