Man pages for Scale4C
Scale4C: an R/Bioconductor package for scale-space transformation of 4C-seq data
| addPointsOfInterest | Add points of interest to a 'Scale4C' object |
| calculateFingerprintMap | Calculate scale-space fingerprint map for given 4C-seq data |
| calculateScaleSpace | Calculate scale-space representation for given 4C-seq data |
| findSingularities | Find singularities in a provided scale-space fingerprint map |
| importBasic4CseqData | Import raw data from a provided Basic4Cseq output file |
| liverData | Example 4C-seq data set of fetal liver data |
| liverDataVP | Example 4C-seq data set of fetal liver data, with added VP |
| outputScaleSpaceTree | Output list of all features for a given scale-space map |
| plotInflectionPoints | Draw a smoothed near-cis profile with marked inflection... |
| plotTesselation | Draw the final scale space tesselation |
| plotTraceback | Draw the traceback results for a list of singular points on a... |
| Scale4C | Creating a Scale4C object |
| Scale4C-class | Class '"Scale4C"' |
