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README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

src/Makevars.common

src/Makevars.win

src/Makevars

src/Rgin-init.c

src/src/CMakeLists.txt

src/src/utils/utils.cc

src/src/utils/random.cc

src/src/utils/CMisc.cc

src/src/utils/CRootFinding.cc

src/src/utils/StringHelper.cc

src/src/utils/CKernels.cc

src/src/feature_selection/shake.cc

src/src/feature_selection/feature_selector.cc

src/src/feature_selection/scones.cc

src/src/regression/CRegression.cc

src/src/stats/univariate_association.cc

src/src/stats/CGamma.cc

src/src/stats/CChi2.cc

src/src/stats/CFisherF.cc

src/src/stats/CStudentT.cc

src/src/stats/CStats.cc

src/src/tools/evo.cc

src/src/tools/shake.cc

src/src/tools/scones.cc

src/src/io/CLogging.cc

src/src/io/CPlinkParser.cc

src/src/io/CIOProgress.cc

src/src/io/CGWASDataIO.cc

src/src/io/grid_views.cc

src/src/io/CSconesIO.cc

src/src/model_selection/grid.cc

src/src/model_selection/CCrossValidation.cc

src/src/model_selection/grid_cv.cc

src/src/gwas/CGWASData.cc

src/src/gwas/CScones.cc

src/include/gin/settings.h

src/include/gin/types.h

src/include/gin/globals.h

src/include/gin/utils/CRootFinding.h

src/include/gin/utils/CMisc.h

src/include/gin/utils/CKernels.h

src/include/gin/utils/CMatrixHelper.h

src/include/gin/utils/StringHelper.h

src/include/gin/utils/random.h

src/include/gin/utils/utils.h

src/include/gin/utils/CMathHelper.h

src/include/gin/feature_selection/feature_selector.h

src/include/gin/feature_selection/scones.h

src/include/gin/feature_selection/shake.h

src/include/gin/regression/CRegression.h

src/include/gin/stats/univariate_association.h

src/include/gin/stats/CStats.h

src/include/gin/stats/CStudentT.h

src/include/gin/stats/CFisherF.h

src/include/gin/stats/CChi2.h

src/include/gin/stats/CGamma.h

src/include/gin/io/grid_views.h

src/include/gin/io/CIOProgress.h

src/include/gin/io/CGWASDataIO.h

src/include/gin/io/CSconesIO.h

src/include/gin/io/CLogging.h

src/include/gin/io/CPlinkParser.h

src/include/gin/model_selection/CCrossValidation.h

src/include/gin/model_selection/grid.h

src/include/gin/model_selection/grid_cv.h

src/include/gin/gwas/CGWASData.h

src/include/gin/gwas/CScones.h

src/lib/CMakeLists.txt

src/lib/Cephes/CMakeLists.txt

src/lib/Cephes/cephes.h

src/lib/Cephes/double/eigens.c

src/lib/Cephes/double/fresnl.c

src/lib/Cephes/double/cmplx.c

src/lib/Cephes/double/acosh.c

src/lib/Cephes/double/spence.c

src/lib/Cephes/double/bdtr.c

src/lib/Cephes/double/pdtr.c

src/lib/Cephes/double/exp10.c

src/lib/Cephes/double/levnsn.c

src/lib/Cephes/double/ellpj.c

src/lib/Cephes/double/hyp2f1.c

src/lib/Cephes/double/btdtr.c

src/lib/Cephes/double/asin.c

src/lib/Cephes/double/powi.c

src/lib/Cephes/double/cpmul.c

src/lib/Cephes/double/setprec.c

src/lib/Cephes/double/ltstd.c

src/lib/Cephes/double/j1.c

src/lib/Cephes/double/sindg.c

src/lib/Cephes/double/ndtri.c

src/lib/Cephes/double/log2.c

src/lib/Cephes/double/polmisc.c

src/lib/Cephes/double/dcalc.c

src/lib/Cephes/double/mod2pi.c

src/lib/Cephes/double/chdtr.c

src/lib/Cephes/double/psi.c

src/lib/Cephes/double/sqrt.c

src/lib/Cephes/double/jv.c

src/lib/Cephes/double/gamma.c

src/lib/Cephes/double/atan.c

src/lib/Cephes/double/planck.c

src/lib/Cephes/double/coil.c

src/lib/Cephes/double/cheby.c

src/lib/Cephes/double/i1.c

src/lib/Cephes/double/expx2.c

src/lib/Cephes/double/shichi.c

src/lib/Cephes/double/i0.c

src/lib/Cephes/double/expn.c

src/lib/Cephes/double/kn.c

src/lib/Cephes/double/monot.c

src/lib/Cephes/double/polyn.c

src/lib/Cephes/double/exp2.c

src/lib/Cephes/double/floor.c

src/lib/Cephes/double/struve.c

src/lib/Cephes/double/polyr.c

src/lib/Cephes/double/round.c

src/lib/Cephes/double/simpsn.c

src/lib/Cephes/double/const.c

src/lib/Cephes/double/simq.c

src/lib/Cephes/double/lsqrt.c

src/lib/Cephes/double/log.c

src/lib/Cephes/double/isnan.c

src/lib/Cephes/double/fltest.c

src/lib/Cephes/double/igami.c

src/lib/Cephes/double/kolmogorov.c

src/lib/Cephes/double/ellpe.c

src/lib/Cephes/double/zeta.c

src/lib/Cephes/double/fltest3.c

src/lib/Cephes/double/fdtr.c

src/lib/Cephes/double/fac.c

src/lib/Cephes/double/asinh.c

src/lib/Cephes/double/time-it.c

src/lib/Cephes/double/gdtr.c

src/lib/Cephes/double/k0.c

src/lib/Cephes/double/sin.c

src/lib/Cephes/double/eltst.c

src/lib/Cephes/double/dtestvec.c

src/lib/Cephes/double/fftr.c

src/lib/Cephes/double/fabs.c

src/lib/Cephes/double/mconf.h

src/lib/Cephes/double/pow.c

src/lib/Cephes/double/zetac.c

src/lib/Cephes/double/mtransp.c

src/lib/Cephes/double/drand.c

src/lib/Cephes/double/jn.c

src/lib/Cephes/double/airy.c

src/lib/Cephes/double/incbet.c

src/lib/Cephes/double/lrand.c

src/lib/Cephes/double/ei.c

src/lib/Cephes/double/chbevl.c

src/lib/Cephes/double/k1.c

src/lib/Cephes/double/yn.c

src/lib/Cephes/double/bernum.c

src/lib/Cephes/double/tanh.c

src/lib/Cephes/double/polrt.c

src/lib/Cephes/double/j0.c

src/lib/Cephes/double/ellie.c

src/lib/Cephes/double/unity.c

src/lib/Cephes/double/clog.c

src/lib/Cephes/double/atanh.c

src/lib/Cephes/double/paranoia.c

src/lib/Cephes/double/polylog.c

src/lib/Cephes/double/arcdot.c

src/lib/Cephes/double/minv.c

src/lib/Cephes/double/euclid.c

src/lib/Cephes/double/mtst.c

src/lib/Cephes/double/cbrt.c

src/lib/Cephes/double/beta.c

src/lib/Cephes/double/incbi.c

src/lib/Cephes/double/hyperg.c

src/lib/Cephes/double/iv.c

src/lib/Cephes/double/rgamma.c

src/lib/Cephes/double/dawsn.c

src/lib/Cephes/double/dcalc.h

src/lib/Cephes/double/sici.c

src/lib/Cephes/double/log10.c

src/lib/Cephes/double/ellpk.c

src/lib/Cephes/double/nbdtr.c

src/lib/Cephes/double/polevl.c

src/lib/Cephes/double/tan.c

src/lib/Cephes/double/ndtr.c

src/lib/Cephes/double/cosh.c

src/lib/Cephes/double/ellik.c

src/lib/Cephes/double/mtherr.c

src/lib/Cephes/double/sincos.c

src/lib/Cephes/double/revers.c

src/lib/Cephes/double/fltest2.c

src/lib/Cephes/double/igam.c

src/lib/Cephes/double/gels.c

src/lib/Cephes/double/stdtr.c

src/lib/Cephes/double/tandg.c

src/lib/Cephes/double/exp.c

src/lib/Cephes/double/makefile

src/lib/Cephes/double/sinh.c

src/lib/maxflow/CMakeLists.txt

src/lib/maxflow/CHANGES.TXT

src/lib/maxflow/GPL.TXT

src/lib/maxflow/maxflow.cpp

src/lib/maxflow/README.TXT

src/lib/maxflow/instances.inc

src/lib/maxflow/maxflow.h

src/lib/maxflow/block.h

src/test/CMakeLists.txt

src/test/data/test_chunks/encoding.ped

src/test/data/test_chunks/read.ped

src/test/data/case1/phenotype.txt

src/test/data/case1/network.txt

src/test/data/case1/genotype.map

src/test/data/case1/genotype.ped

src/test/data/case1/interactions.png

src/test/data/case2/network.txt

src/test/data/case2/gene2snp.tsv

src/test/data/case2/truth.tsv

src/test/data/case2/ppi.tab

src/test/data/case2/genotypes.ped

src/test/data/case2/genotypes.map

src/test/data/case2/snp_list.csv

src/test/mock/stats/mock_univariate_association.cc

src/test/mock/model_selection/mock_grid_cv.cc

src/test/unit/utils/test_CMatrixHelper.cc

src/test/unit/feature_selection/test_shake.cc

src/test/unit/feature_selection/test_scones.cc

src/test/unit/stats/test_univariate_association.cc

src/test/unit/stats/test_CChi2.cc

src/test/unit/io/test_grid_views.cc

src/test/unit/io/test_CPlinkParser.cc

src/test/unit/model_selection/test_grid_cv.cc

src/test/unit/model_selection/test_grid.cc

src/test/unit/gwas/test_CGWASData.cc

src/test/integration/testShake.h

src/test/integration/testShake.cc

R/pkgconfig.R vignettes/Rgin-UsingCppLibraries.Rmd inst/doc/Rgin-UsingCppLibraries.Rmd

inst/doc/Rgin-UsingCppLibraries.html

Rgin documentation built on Nov. 8, 2020, 6:50 p.m.

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