R/summary.lpe.paired.fdr.R

In PLPE: Local Pooled Error Test for Differential Expression with Paired High-throughput Data

'summary.lpe.paired.fdr' <- function(object, ...)
{
    cat("\n FDR for PLPE \n")
    cat("\n data type :", format(object$data.type))
    cat("\n specification for the estimator :", format(object$estimator))
    cat("\n quantile for intercals of intensities :", object$q)
    cat("\n weight parameter :", object$w)
    cat("\n estimate the weight :", object$w.estimator)
    cat("\n estimated proportion of non-null peptides :", object$pi0)
    cat("\n number of iteration :", object$n.iter)
    cat("\n numeric vector of probabilities with values in [0,1] :", object$lambda)
    cat("\n \n matrix for test results including FDRs \n")
    print(head(object$FDR))
    cat(ifelse(dim(object$FDR)[1] > 6, "...", ""), "\n")
    invisible(object)
}