Nebulosa: Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation

This package provides a enhanced visualization of single-cell data based on gene-weighted density estimation. Nebulosa recovers the signal from dropped-out features and allows the inspection of the joint expression from multiple features (e.g. genes). Seurat and SingleCellExperiment objects can be used within Nebulosa.

Package details

AuthorJose Alquicira-Hernandez [aut, cre] (<https://orcid.org/0000-0002-9049-7780>)
Bioconductor views DimensionReduction GeneExpression SingleCell Software Visualization
MaintainerJose Alquicira-Hernandez <alquicirajose@gmail.com>
LicenseGPL-3
Version1.0.2
URL https://github.com/powellgenomicslab/Nebulosa
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Nebulosa")

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Nebulosa documentation built on March 24, 2021, 6 p.m.