Metab: Metab: An R Package for a High-Throughput Analysis of Metabolomics Data Generated by GC-MS.

Metab is an R package for high-throughput processing of metabolomics data analysed by the Automated Mass Spectral Deconvolution and Identification System (AMDIS) (http://chemdata.nist.gov/mass-spc/amdis/downloads/). In addition, it performs statistical hypothesis test (t-test) and analysis of variance (ANOVA). Doing so, Metab considerably speed up the data mining process in metabolomics and produces better quality results. Metab was developed using interactive features, allowing users with lack of R knowledge to appreciate its functionalities.

Package details

AuthorRaphael Aggio <ragg005@aucklanduni.ac.nz>
Bioconductor views AMDIS GCMS ImmunoOncology MassSpectrometry Metabolomics
MaintainerRaphael Aggio <ragg005@aucklanduni.ac.nz>
LicenseGPL (>=2)
Version1.24.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Metab")

Try the Metab package in your browser

Any scripts or data that you put into this service are public.

Metab documentation built on Nov. 8, 2020, 5:36 p.m.