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GDS files are widely used to represent genotyping or sequence data. The GDSArray package implements the `GDSArray` class to represent nodes in GDS files in a matrix-like representation that allows easy manipulation (e.g., subsetting, mathematical transformation) in _R_. The data remains on disk until needed, so that very large files can be processed.
Package details |
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Author | Qian Liu [aut, cre], Martin Morgan [aut], Hervé Pagès [aut], Xiuwen Zheng [aut] |
Bioconductor views | DataRepresentation GenotypingArray Infrastructure Sequencing |
Maintainer | Qian Liu <qliu7@buffalo.edu> |
License | GPL-3 |
Version | 1.10.1 |
URL | https://github.com/Bioconductor/GDSArray |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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