EpiTxDb-class | EpiTxDb objects |
EpiTxDb-data | EpiTxDb internal data |
EpiTxDb-package | 'EpiTxDb' - Storing and accessing epitranscriptomic... |
makeEpiTxDb | Creating a 'EpiTxDb' from user supplied annotations as... |
makeEpiTxDbFromGRanges | Create a 'EpiTxDb' object from a 'GRanges' object |
makeEpiTxDbFromRMBase | Create a 'EpiTxDb' object from RMBase v2.0 online resources |
makeEpiTxDbFromtRNAdb | Create a 'EpiTxDb' object from tRNAdb resources |
modifications | Getting modification data from a 'EpiTxDb-object' |
positionSequence | Generate integer sequences from position information of... |
rescale | Rescaling 'Ranges' object |
select | Using the "select" interface on 'EpiTxDb' objects |
shiftGenomicToTranscript | Shift 'GRanges' coordinates based on another 'GRanges' object |
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