Man pages for EMDomics
Earth Mover's Distance for Differential Analysis of Genomics Data
| calculate_cvm | Cramer von Mises for differential analysis of genomics data |
| calculate_cvm_gene | Calculate CVM score for a single gene |
| calculate_emd | Earth Mover's Distance for differential analysis of genomics... |
| calculate_emd_gene | Calculate EMD score for a single gene |
| calculate_ks | Calculate the Komolgorov-Smirnov test statistic and q-values... |
| calculate_ks_gene | Calculate KS score for a single gene |
| CVMomics | Create an CVMomics object |
| EMDomics | Create an EMDomics object |
| emdomics-package | Earth Mover's Distance algorithm for differential analysis of... |
| KSomics | Create an KSomics object |
| plot_cvm_density | Plot distributions and CVM score for a gene. |
| plot_cvmnull | Plot null distribution of permuted cvm scores vs. calculated... |
| plot_cvmperms | Plot histogram of CVM scores calculated via random... |
| plot_emd_density | Plot distributions and EMD score for a gene. |
| plot_emdnull | Plot null distribution of permuted EMD scores vs. calculated... |
| plot_emdperms | Plot histogram of EMD scores calculated via random... |
| plot_ks_density | Plot distributions and KS score for a gene. |
| plot_ksnull | Plot null distribution of permuted ks scores vs. calculated... |
| plot_ksperms | Plot histogram of KS scores calculated via random... |
