Files in Doscheda

A DownStream Chemo-Proteomics Analysis Pipeline

README.md R/setParameters.R R/pcaPlot.R R/data_doc.R R/meanSdPlot.R R/doschedaset.R R/boxplot.ChemoProtSet.R R/setData.R R/non_exported.R R/runDoscheda.R R/doschedaApp.R R/plot.ChemoProtSet.R R/replicatePlot.R R/doscheda.R R/fitModel.R R/runNormalisation.R R/volcanoPlot.R R/accessor.R R/makeReport.R R/corrPlot.R R/densityPlot.R R/removePeptides.R vignettes/Doscheda.Rmd man/doscheda.Rd man/pcaPlot-methods.Rd man/setData-methods.Rd man/getParameters-methods.Rd man/replicatePlot-methods.Rd man/getInput-methods.Rd man/volcanoPlot-methods.Rd man/fitModel-methods.Rd man/getDatasets-methods.Rd man/setParameters-methods.Rd man/runNormalisation-methods.Rd man/runDoscheda.Rd man/doschedaApp.Rd man/corrPlot-methods.Rd man/meanSdPlot-methods.Rd man/ChemoProtSet-class.Rd man/getNorm-methods.Rd man/processedExample.Rd man/getFinal-methods.Rd man/densityPlot-methods.Rd man/plot.ChemoProtSet.Rd man/removePeptides-methods.Rd man/boxplot-ChemoProtSet-method.Rd man/makeReport.Rd man/doschedaData.Rd tests/testthat.R tests/testthat/test-normal.R inst/doc/Doscheda.R inst/doc/Doscheda.Rmd inst/rmd/report.Rmd inst/shiny-examples/DOSCHEDA_app/sigmoidaltext.Rmd inst/shiny-examples/DOSCHEDA_app/report.Rmd inst/shiny-examples/DOSCHEDA_app/app.R