This package is designed to provide solutions for quality assessment and to detect differentially expressed genes for the Affymetrix GeneChips, including both 3' -arrays and gene 1.0-ST arrays. The package generates comprehensive analysis reports in HTML format. Hyperlinks on the report page will lead to a series of QC plots, processed data, and differentially expressed gene lists. Differentially expressed genes are reported in tabular format with annotations hyperlinked to online biological databases.
Package details |
|
---|---|
Author | Xiwei Wu, Arthur Li |
Bioconductor views | Annotation DifferentialExpression Microarray OneChannel Preprocessing QualityControl ReportWriting StatisticalMethod Visualization |
Maintainer | Arthur Li <xueli@coh.org> |
License | LGPL (>= 2.0) |
Version | 1.50.0 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
|
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.