ASICS: Automatic Statistical Identification in Complex Spectra

With a set of pure metabolite reference spectra, ASICS quantifies concentration of metabolites in a complex spectrum. The identification of metabolites is performed by fitting a mixture model to the spectra of the library with a sparse penalty. The method and its statistical properties are described in Tardivel et al. (2017) <doi:10.1007/s11306-017-1244-5>.

Package details

AuthorGaëlle Lefort [aut, cre], Rémi Servien [aut], Patrick Tardivel [aut], Nathalie Vialaneix [aut]
Bioconductor views Cheminformatics DataImport Metabolomics Software
MaintainerGaëlle Lefort <gaelle.lefort@inra.fr>
LicenseGPL (>= 2)
Version2.6.1
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ASICS")

Try the ASICS package in your browser

Any scripts or data that you put into this service are public.

ASICS documentation built on Nov. 8, 2020, 8:19 p.m.