ACE: Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing

Uses segmented copy number data to estimate tumor cell percentage and produce copy number plots displaying absolute copy numbers.

Package details

AuthorJos B Poell
Bioconductor views CopyNumberVariation Coverage DNASeq Sequencing Visualization WholeGenome
MaintainerJos B Poell <j.poell@amsterdamumc.nl>
LicenseGPL-2
Version1.8.0
URL https://github.com/tgac-vumc/ACE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ACE")

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ACE documentation built on Nov. 8, 2020, 5:30 p.m.